Banking Knowledge Guide

Payment Processing Complete Guide for Merchants

Dado Kalem | June 19, 2025

This featured video was created using artificial intelligence. The article, however, was written and edited by actual payment experts.

The Merchant’s 2025 Guide to Payment Processing

For eCommerce merchants, not taking card payments simply isn’t an option. Before you can accept a card payment, though, you need support from a service provider that can handle card processing for you. You may be wondering how the whole thing works. Not to worry; we’ve got your back. In this guide, I’ll explain how payment processing works, the role of the payment processor, and what to look for when picking a provider. Before we get too far into the details though, let’s start with the basics.

What is a Payment Processor?

Payment Processor

[noun]/pā • mənt • prä • se • sər/

A payment processor is a company that facilitates credit card payments on behalf of a merchant by receiving, communicating, and relaying the cardholder’s information between issuing and acquiring banks.

A payment processor manages transactions between the payer and the payee’s bank in a financial transaction. This system primarily facilitates the transfer of funds from customers’ accounts to merchants’ accounts when purchases are made using debit cards, credit cards, or other electronic payment methods.

Payment processors ensure secure and efficient transaction processing. This is done by verifying the details involved in a payment, such as a cardholder’s information and the availability of funds. They facilitate and communicate transaction details between the bank, the merchant, and the customer. Thus, they act as an essential bridge in the financial ecosystem.

Payment Processors, Gateways, & Acquirers: What’s the Difference?

TL;DR

Processors, gateways, and acquirers each perform distinct, key functions in the payment process. That said, some providers may offer more than one service at a time, like packaging processing and acquiring services together.

Three parties — processors, gateways, and acquirers — are integral to the transaction process. While they often work closely together, each has a distinct role. So, let's hammer out each party’s role real quick.

The processor works on your behalf as a merchant. It confirms the validity of a transaction, checks the availability of funds, and enables the transfer from the customer's account to the merchant's account. In contrast:

Payment Gateway

Payment Gateway

A gateway is the digital equivalent of a point-of-sale terminal. The gateway encrypts sensitive information like credit card numbers to ensure that information passes securely between you, your customer, the payment processor, and the acquiring bank.

Learn more about gateways
Acquiring Bank

Acquiring Bank

An acquiring bank is a financial institution that maintains your merchant bank account. This bank receives the payment from the customer's bank. Once the transaction is authorized, the acquiring bank deposits the transaction amount into your account.

Learn more about acquirers

What Do Payment Processors Do?

TL;DR

Your processor routes inbound payments to your bank account. They also help with compliance, fraud and chargeback prevention, and other essential business functions.

Payment processors allow merchants to accept credit and debit card payments by relaying transaction data between the merchant’s acquiring bank and the cardholder’s issuing bank. 

Payment processors also:

Authorize & Authenticate Transactions

Payment processors help in the process of verifying a buyer’s identity and payment method to ensure a buyer has enough funds and/or a sufficient credit limit to make a purchase.

Process Transactions

Payment processors receive and transfer transaction details about the customer’s payment method to the merchant’s acquiring bank. The processor batches transactions, then forwards this information to applicable card issuers clearing and settlement.

Prevent Fraud

Payment processors use security measures like encryption and tokenization to detect and prevent fraud during transactions. In addition, reputable processors will comply with PCI-DSS standards, outlining how to store, retain, dispose of, and control sensitive information.

Provide Reporting & Analytics Tools

Payment processors monitor critical transaction details, including sales data, chargeback trends, and cash flow information. Merchants can leverage this data to make informed financial forecasts and business decisions about the products or services they offer.

Offer Currency Conversion for International Transactions

Payment processors work in partnership with card networks to handle currency conversion for international transactions. Services like Dynamic Currency Conversion (DCC) give cardholders the flexibility to pay for transactions in either their home currency or the local currency.

Facilitate Recurring Billing & Subscription Payments

Payment processors automate recurring and card-on-file transactions for businesses that use subscription-based services or products. This cuts down on manual processing, saves merchants time, and reduces the rate of merchant error.

Encrypt Sensitive Data

Payment processors also help merchants to comply with payment industry regulations by encrypting or tokenizing payment information. Examples include card numbers, billing addresses, and other personally identifying information. This protects payment data and reduces the risk of data breaches, loss, or fraud.

Help With Chargeback Management

Payment processors play a role in chargeback management. Merchants can furnish payment processing data in representment and can rely on processors to detect and block suspicious transactions before they escalate to disputes.

So, that is a very basic overview. For more details about specific topics related to payment processing, continue on to the next chapters listed below:

Chapter 1

How Payment Processing Works

Processing credit card payments can typically be broken into two parts: Authorization and Settlement (funding). Authorization is when you take the cardholder’s credit card account information, which is then transmitted to your payment processor. At this point, the payment can either be authorized or declined.

After authorization, your payment processor transmits a group or “batch” of authorized transactions. The bank takes the transaction amount(s) from the cardholder’s account and sees that they are moved to your merchant account.

It can sound a little convoluted. Fortunately, most of the work is taken care of behind the scenes by your processor.

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Chapter 2

Payment Process Flow

With all of the participants and moving parts, getting started in payment processing can seem overwhelming. Part of the issue is that there are so many moving parts and different parties involved.

Obviously there is you, the merchant, and your customer. Each of you will also have your respective banks. Then there is a processor, a gateway, and the associated card network. There may be other parties involved, too, depending on the specifics of the transaction. Each player has an important role to play.

Read More

Chapter 3

Credit and Debit Card Processing

They may look similar, but debit cards and credit cards aren’t the same thing. Debit cards are tied to an existing account balance, which is “debited” to conduct a transaction. Credit cards, on the other hand, are tied to a line of credit.

Processing for both follows more or less the same basic outline. Though, there are some key differences. There’s pricing, for one thing; debit card processing is more likely to be based on a flat rate, as opposed to a straight percentage. Credit card transactions are usually settled faster, too, and present a slightly higher risk of fraud and chargebacks.

Read More

Chapter 4

No-Code Payment Processing

Consumers constantly demand faster, more convenient payment methods. Fortunately, there are tools that can help automate processes behind the scenes, saving you time and money.

“No-code” processors make it easy to integrate processors into your existing CRM and get up and running in a matter of hours (rather than weeks). And, with service providers collecting more valuable data and rolling out more sophisticated technology than ever before, these tools stand to get exponentially more sophisticated in coming years.

With so many new technologies, however, it can be hard to keep up. That’s why it’s crucial to work with a payment processor who is evolving to match the new technology, and has the know-how to leverage gathered data to help you run your business better.

Read More

Chapter 5

High-Risk Credit Card Processing

Some sellers carry more inherent risk than others. This could be due to their location, product vertical, sales model, or a combination of different factors. In any case, these “high-risk” merchants may need to work with a specialized processor to make payments happen.

High-risk processors are a subset of merchant payment processing services. These service providers will generally allow for greater risk exposure in exchange for higher fees to maintain the merchant’s account.

Read More

Chapter 6

Online Payment Processing

With the exception of cash, all payment types require some sort of processing. There must be a method of reliably capturing the customer’s account information in order to transfer funds from their account to yours.

In brick-and-mortar stores, the customer will supply data via a physical terminal, using either an actual plastic card or an eWallet. Online payment information is usually keyed in by the consumer during the checkout process. These methods all have a good deal of crossover… as well as some unique quirks.

Read More

Chapter 7

Alternative Payments

We’ve primarily been talking about payment cards so far. But, there is a growing number of other payment options that customers could take advantage of.

You have old-school paper checks, of course. But, there are new technologies as well, including BNPL (or “buy now pay later”), cryptocurrency, and so on. All these methods will require some sort of payment processing, but the method will vary.

Read More

Chapter 8

Payment Security

The security of your processing very heavily depends on your provider. One assurance a reputable provider should always offer is adherence to PCI compliance requirements, which is a set of universally accepted data security protocols.

Of course, PCI compliance is just the baseline of what’s expected. Other security techniques include tools for data encryption and server identification, and certificates that show compliance.

Read More

Chapter 9

Credit Card Processing Fees

As you might expect, payment processing does not come free.

“Processing fees” are made up of three separate charges: interchange fees, assessment fees, and payment processing fees. All things considered, you’ll typically be charged between 1.5% to 3.5% of the total on every transaction you process, although the exact fee will vary.

While there are numerous models and pricing tiers available, nearly all are based on one of four common pricing types: flat fee pricing, flat rate subscription, tiered pricing, or “interchange plus” pricing.

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Chapter 10

Merchant of Record

A merchant of record (MoR) is an entity that assumes legal responsibility for financial transactions between buyers and sellers. It’s almost like a value-added middleman that makes it easier for merchants to accept payments, especially from other countries. Professional MoR providers sell goods or services and accept liability on behalf of the seller.

Read More

Chapter 11

Best Credit Card Processing Companies

Choosing a processing provider can be an arduous process.

Different providers’ marketing may use the same words, but they could mean very different things. Since you’ll probably be entering into a long-term contract, you need to do as much research as you can up front.

Look at fees, pricing structures, and transmission and storage security practices. Also, look at which payment methods the processor supports (beyond debit and credit cards). To help you out, we’ve created a list of some reputable providers, along with what they offer, to give you a good head start on your search.

Read More

Chapter 12

Payment Trends

Changes happen fast in the payments space. You need to continue to adapt and evolve to survive.

More players are entering the field as traditional players and banks are joined by ISOs. Consumer payment methods such as digital wallets and contactless payments continue to gain acceptance, shifting away from providers who only process payment cards.

But there’s also another factor to consider: fraud. Payment processing solutions often provide at least a minimal level of pre-transaction fraud screening, but many disputes are the result of first-party fraud, which can happen days, weeks, or even months after the transaction was processed. True fraud prevention and risk mitigation requires a more comprehensive approach.

Read More

FAQs

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faq

What is payment processing?

Payment processing refers to the system that enables businesses to accept credit and debit card payments. It involves the secure transmission of cardholder data between your business, the customer’s bank (issuing bank), and your bank (acquiring bank). A payment processor handles the authorization, verification, and transfer of funds on your behalf, allowing you to accept card payments without managing the technical infrastructure yourself.

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faq

How long does payment processing take?

Payment processing happens in two stages. Authorization occurs in seconds: when a customer swipes, dips, or enters their card information, the processor verifies the card is valid and the funds are available. Settlement, where funds actually transfer to your merchant account, typically takes 1-3 business days depending on your processor and bank. Some processors offer next-day or same-day funding for an additional fee.

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faq

How much does payment processing cost?

Most merchants pay between 1.5% and 3.5% of each transaction in processing fees. This total is made up of three components: interchange fees (paid to the card-issuing bank), assessment fees (paid to the card network like Visa or Mastercard), and the processor’s markup. Exact costs depend on your pricing model, transaction volume, industry, and whether transactions are card-present or card-not-present.

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What’s the difference between a payment processor and a payment gateway?

A payment processor handles the actual movement of funds between the customer’s bank and your merchant account. A payment gateway is the technology that securely captures and transmits card data from the point of sale (whether online or in-store) to the processor. Think of the gateway as the front door and the processor as the engine. Many providers bundle both services together, but they are technically distinct functions.

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What is high-risk payment processing?

High-risk payment processing refers to specialized services for merchants in industries that carry elevated fraud, chargeback, or regulatory risk. This includes businesses in travel, subscription services, adult content, CBD, firearms, and certain eCommerce verticals. High-risk processors accept greater exposure in exchange for higher fees and may require reserves or rolling holds. If traditional processors have declined your application, a high-risk specialist may be able to help.

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Do I need to be PCI compliant to accept card payments?

Yes. Any business that accepts, processes, stores, or transmits credit card data must comply with the Payment Card Industry Data Security Standard (PCI DSS). Compliance requirements vary based on your transaction volume and how you handle card data. Most small merchants can self-assess using a questionnaire, while larger merchants may require external audits. Your payment processor should provide guidance and tools to help you maintain compliance.

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What should I look for when choosing a payment processor?

Key factors include pricing transparency (watch for hidden fees), supported payment methods, contract terms and cancellation policies, integration options with your existing systems, security features, and customer support quality. Also consider whether the processor has experience with your industry, especially if you operate in a high-risk vertical. Reading reviews and asking for references can help you avoid providers with poor service reputations.

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